XFileSharing Pro - Load Averages are fine but site still lagging.

[RockDiz]

My load averages are very good but my site still loads slow.
If I login through the main web server, everything is fast and what not. WHen I try to go to my site, i get very slow speeds.

here's my ATOP:
http://i47.tinypic.com/afdl5z.png

I'm not quite sure how to interpret it nor what to do with teh information.
Any suggestions? Thanks!

[nyan]

1. Keep your problems in one topic
2. Post Atop from the current load (not load avg since boot, let it run for a minute then take screenshot..)
3. Post your config's (my.cnf, perl process manager)
4. Post what changes you've made after we suggest something

It is very annoying, and you're not going to fix your website by making new topics every day.